Checkrun

Paid#3 of 28 in Check Printing SoftwareCheque Printing Software

Checkrun: A control-focused QuickBooks Online payment tool with meaningful setup and usage fees. Ranked #3 of 28 in Check Printing Software by our editors (9.1/10); pricing: 15-day trial; best for quickBooks Online teams needing controls.

9.1/10★★★★★Editor score

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At a glance

• Editor score
  9.1 / 10
• Pricing
  15-day trial
• Best for
  QuickBooks Online teams needing controls
• Free plan
  No
• Paid from
  $50/mo
• MICR printing
  Yes
• Facts checked
  21 Sep 2026

• Where it wins

  • Two-way QuickBooks Online synchronization
  • MICR, blank-stock, and pre-printed check support
  • Approvals, ACH, Positive Pay, signatures, and audit trails

• Where it doesn't

  • QuickBooks Desktop is not supported
  • $199 one-time implementation fee
  • Usage fees apply to printing, ACH export, and mailing

Our verdict on Checkrun

Checkrun is a cloud-based check printing and bill payment platform for businesses, accountants, and bookkeepers using QuickBooks Online. It connects through two-way QuickBooks Online synchronization and supports local and remote check printing, blank and pre-printed check stock, ACH payments, approval workflows, and payment controls. Web access is paired with mobile approval apps for iOS and Android, making it suited to teams that need payment review and authorization beyond a single desktop workstation.

The published plans show a $50 monthly plan with QuickBooks Online sync, ACH or check payments, cloud check printing, custom approval workflows, Positive Pay file generation, and the Mobile Approval App. A $199 one-time implementation fee applies, while Local Check Printing and ACH File Export are each priced at $0.35 per payment. Print and Mail Service costs $1.95 per check. The 15-day free trial gives prospective customers a way to review the workflow before committing, but ongoing costs rise with payment volume and service usage.

Checkrun's strongest fit is QuickBooks Online operations that need more than basic check output. MICR printing, same-day check printing and mailing, electronic signatures, user roles, audit trails, check-image synchronization, and Positive Pay file generation address approval, fraud-control, and recordkeeping needs in one service. Its ecosystem focus is narrow: QuickBooks Online is the listed integration, and QuickBooks Desktop is not supported. Choose Checkrun when payment controls, remote processing, and mobile approvals justify the recurring and per-payment charges; choose another option when desktop accounting support, broader integrations, or lower variable costs matter more.

Questions about Checkrun

Does Checkrun have a free plan? No free plan is listed; paid plans start at $50/mo (Monthly plan).

How much does Checkrun cost? Checkrun lists 5 paid plans; the lowest is Monthly plan at $50/mo.

Is there a free trial of Checkrun? Yes: a 15-day free trial.

What does Checkrun run on? Web, iOS and Android. It runs in the cloud and as a mobile app.

What does Checkrun integrate with? 1 integration: QuickBooks Online.

Who is Checkrun built for? Small businesses and mid-market companies (our editorial estimate).

Your product? Our editors can test Checkrun in depth and publish a review, labelled as paid · from $149/mo →

Checkrun pricing

All 5 Checkrun plans and prices →

Checkrun fact sheet

Checkrun integrations

Checkrun lists 1 integrations on its own site.

• QuickBooks Online

Alternatives to Checkrun

• Zil MoneyA free web-based platform for customizable checks, payments, imports, and business workflows.9.4
• OnlineCheckWriter.comA web-based check and payment platform with broad accounting integrations.9.2
• PPrintBossA mature, low-cost choice for QuickBooks users needing MICR and blank-stock printing.9.0

See all Checkrun alternatives →

Checkrun vs the competition

• Checkrun vs Zil Money
• Checkrun vs OnlineCheckWriter.com
• PCheckrun vs PrintBoss
• Checkrun vs VersaCheck
• Checkrun vs ezCheckPrinting
• CCheckrun vs Checkeeper

Compare Checkrun with any tool side by side →

Also Ranked In

Checkrun is ranked in 2 of our directories.

• #5Cheque Printing Software21 tools ranked→

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The editor score above is our own research. What this page doesn't have yet is a reader's view — what you used Checkrun for, what worked and what didn't. No stars are seeded and no review is paid for; an editor reads every one before it appears.

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Featured on iTechGuides

Reviewed by iTechGuides Editors · Editorial team · Updated Nov 2026

Advertiser disclosure: iTechGuides is reader-supported. Vendors can pay for top positions in our rankings and for a place on other products' pages, and we may earn a commission when you click some links. Bought places stand at the number bought; this page and our disclosure say so. Paying vendors may get a fuller, more detailed review from our editors, and that review can change their score. How we rank.

Last updated 14 Nov 2026 · How we research and update