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Head-to-head · Nonprofit Payroll Software

ChurchSoftware Payroll vs QuickBooks Payroll

  • Updated Oct 2026
  • Both researched from official sources
  • 4 checks side by side
QuickBooks Payroll #8 in Nonprofit Payroll Software 6.9/10 30-day trial Free trial✓ 2 of 5 features Visit QuickBooks

ChurchSoftware Payroll leads on 1 check, QuickBooks Payroll on 0, and 3 are even. Who comes out ahead on the 4 yes/no, price and count checks where we have data for both products. The editor score weighs everything else too.

Our verdict

  • Highest scoreChurchSoftware Payroll · 7.7/10
  • Lowest starting priceChurchSoftware Payroll · $25/mo
  • Free trialonly QuickBooks Payroll

ChurchSoftware Payroll scores higher on our rubric for nonprofit payroll software: 7.7 against 6.9 out of 10; our editors rank them #6 and #8.

ChurchSoftware Payroll is cheaper to start at $25/mo against $50/mo.

ChurchSoftware Payroll is the better fit for churches needing straightforward payroll. QuickBooks Payroll is the better fit for quickBooks-centered nonprofits.

  • ChurchSoftware Payroll fits best

    Churches needing straightforward payroll

  • QuickBooks Payroll fits best

    QuickBooks-centered nonprofits

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Side by side

Feature ChurchSoftware Payroll 7.7/10 Visit ↗ QuickBooks Payroll 6.9/10 Visit ↗
At a glance
Editor score 7.7 6.9
Ranking #6 in Nonprofit Payroll Software #8 in Nonprofit Payroll Software
Best for Churches needing straightforward payroll QuickBooks-centered nonprofits
Pricing model Paid Paid
Starting price $25/mo (best) $50/mo
Free plan — —
Free trial — 30 days
Deployment Cloud Cloud, Mobile
Platforms Web Web, iOS, Android
Features ChurchSoftware Payroll 2/5 · QuickBooks Payroll 2/5
Tax filing included ✓ ✓
Nonprofit tax support Not checked yet Not checked yet
Multi-state payroll ✓ ✓
Contractor payments Not checked yet Not checked yet
Time tracking Not checked yet Not checked yet
Specs
Employee limit Not checked yet Not checked yet
Our review
Pros
  • Payroll processing in all 50 states
  • Direct deposit with automated payroll withholdings
  • Tax filings, reporting, and local and federal tax compliance handling
  • Automates payroll tax calculations, filings, and payments
  • Provides direct deposit and employee self-service portals
  • Connects with QuickBooks Online, Square, and benefits platforms
Cons
  • Web access only
  • Narrow focus within the ChurchSoftware ecosystem
  • No free payroll plan
  • Higher-tier plans are needed for time tracking and scheduling
  • The product is designed for small businesses, not only nonprofits
  • Less suited to buyers prioritizing tip management or one payroll frequency
Our verdict

ChurchSoftware Payroll is a paid payroll add-on for churches, ministries, and other 501(c)(3) organizations. It handles payroll processing in all 50 U.S. states and includes direct deposit, automated withholdings, tax filings, reporting,…

Read the review →

QuickBooks Payroll is a cloud payroll service for small businesses, including nonprofits that already work in the QuickBooks ecosystem. It calculates, files, and pays payroll taxes; supports direct deposit; provides employee portals for…

Read the review →
  1. ChurchSoftware PayrollNonprofit Payroll Software 7.7Paid
  2. QuickBooks PayrollNonprofit Payroll Software 6.930-day trial

Strengths and trade-offs

  • ChurchSoftware Payroll — where it wins

    • Payroll processing in all 50 states
    • Direct deposit with automated payroll withholdings
    • Tax filings, reporting, and local and federal tax compliance handling

    Where it doesn't

    • Web access only
    • Narrow focus within the ChurchSoftware ecosystem
    • No free payroll plan
  • QuickBooks Payroll — where it wins

    • Automates payroll tax calculations, filings, and payments
    • Provides direct deposit and employee self-service portals
    • Connects with QuickBooks Online, Square, and benefits platforms

    Where it doesn't

    • Higher-tier plans are needed for time tracking and scheduling
    • The product is designed for small businesses, not only nonprofits
    • Less suited to buyers prioritizing tip management or one payroll frequency

More comparisons

Reviewed by iTechGuides Editors · Editorial team · Updated Oct 2026

Last updated · How we research and update